Item Type | Name |
Concept
|
Cell Line, Transformed
|
Concept
|
Cell Differentiation
|
Concept
|
Cell Nucleus
|
Concept
|
Cells
|
Concept
|
Cell Transformation, Viral
|
Concept
|
Cell Cycle
|
Concept
|
Dendritic Cells
|
Concept
|
Epithelial Cells
|
Concept
|
Tumor Stem Cell Assay
|
Concept
|
Cell Culture Techniques
|
Concept
|
Tumor Cells, Cultured
|
Concept
|
Cell Proliferation
|
Concept
|
Single-Cell Analysis
|
Concept
|
Pluripotent Stem Cells
|
Concept
|
Stromal Cells
|
Concept
|
Cell Lineage
|
Concept
|
Cell Line, Tumor
|
Concept
|
Induced Pluripotent Stem Cells
|
Concept
|
Cell Line
|
Concept
|
Cells, Cultured
|
Concept
|
Polymorphism, Single Nucleotide
|
Concept
|
Genomics
|
Academic Article
|
Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data.
|
Academic Article
|
Understanding mechanisms underlying human gene expression variation with RNA sequencing.
|
Academic Article
|
Accurate inference of transcription factor binding from DNA sequence and chromatin accessibility data.
|
Academic Article
|
Noisy splicing drives mRNA isoform diversity in human cells.
|
Academic Article
|
The effects of EBV transformation on gene expression levels and methylation profiles.
|
Academic Article
|
Genomic-scale capture and sequencing of endogenous DNA from feces.
|
Academic Article
|
Characterizing natural variation using next-generation sequencing technologies.
|
Academic Article
|
Genomics: ENCODE explained.
|
Academic Article
|
Dissecting the regulatory architecture of gene expression QTLs.
|
Academic Article
|
Time-dependent transcriptional profiling links gene expression to mitogen-activated protein kinase kinase 4 (MKK4)-mediated suppression of omental metastatic colonization.
|
Academic Article
|
The contribution of RNA decay quantitative trait loci to inter-individual variation in steady-state gene expression levels.
|
Academic Article
|
Expression quantitative trait loci detected in cell lines are often present in primary tissues.
|
Academic Article
|
The combination of a genome-wide association study of lymphocyte count and analysis of gene expression data reveals novel asthma candidate genes.
|
Academic Article
|
Using genomic tools to study regulatory evolution.
|
Academic Article
|
DNA methylation patterns associate with genetic and gene expression variation in HapMap cell lines.
|
Academic Article
|
Regulatory element copy number differences shape primate expression profiles.
|
Academic Article
|
Gene expression differences among primates are associated with changes in a histone epigenetic modification.
|
Academic Article
|
DNase?I sensitivity QTLs are a major determinant of human expression variation.
|
Academic Article
|
High-resolution mapping of expression-QTLs yields insight into human gene regulation.
|
Academic Article
|
Deciphering the genetic architecture of variation in the immune response to Mycobacterium tuberculosis infection.
|
Academic Article
|
Controls of nucleosome positioning in the human genome.
|
Academic Article
|
General olfactory sensitivity database (GOSdb): candidate genes and their genomic variations.
|
Academic Article
|
The effect of freeze-thaw cycles on gene expression levels in lymphoblastoid cell lines.
|
Academic Article
|
Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.
|
Academic Article
|
Social environmental effects on gene regulation.
|
Academic Article
|
Epigenetic modifications are associated with inter-species gene expression variation in primates.
|
Academic Article
|
Reprogramming LCLs to iPSCs Results in Recovery of Donor-Specific Gene Expression Signature.
|
Academic Article
|
The genetic and mechanistic basis for variation in gene regulation.
|
Academic Article
|
Genomic variation. Impact of regulatory variation from RNA to protein.
|
Academic Article
|
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.
|
Academic Article
|
Identification of genetic variants that affect histone modifications in human cells.
|
Academic Article
|
The genetic architecture of gene expression levels in wild baboons.
|
Academic Article
|
A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics.
|
Academic Article
|
msCentipede: Modeling Heterogeneity across Genomic Sites and Replicates Improves Accuracy in the Inference of Transcription Factor Binding.
|
Academic Article
|
Metastasis Suppressors Regulate the Tumor Microenvironment by Blocking Recruitment of Prometastatic Tumor-Associated Macrophages.
|
Academic Article
|
Genome-Wide Association Studies of the Human Gut Microbiota.
|
Academic Article
|
Mycobacterial infection induces a specific human innate immune response.
|
Academic Article
|
Bacterial infection remodels the DNA methylation landscape of human dendritic cells.
|
Academic Article
|
Synthesis, biological studies and molecular dynamics of new anticancer RGD-based peptide conjugates for targeted drug delivery.
|
Academic Article
|
Genetic Variation, Not Cell Type of Origin, Underlies the Majority of Identifiable Regulatory Differences in iPSCs.
|
Academic Article
|
RNA splicing is a primary link between genetic variation and disease.
|
Academic Article
|
Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling.
|
Academic Article
|
The human olfactory transcriptome.
|
Academic Article
|
Integrated analyses of gene expression and genetic association studies in a founder population.
|
Academic Article
|
DNA methylation in lung cells is associated with asthma endotypes and genetic risk.
|
Academic Article
|
Gene expression in local stroma reflects breast tumor states and predicts patient outcome.
|
Academic Article
|
Batch effects and the effective design of single-cell gene expression studies.
|
Academic Article
|
Dual-drug RGD conjugates provide enhanced cytotoxicity to melanoma and non-small lung cancer cells.
|
Academic Article
|
Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9.
|
Academic Article
|
Impact of regulatory variation across human iPSCs and differentiated cells.
|
Academic Article
|
Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs.
|
Academic Article
|
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes.
|
Academic Article
|
Human genomics: Cracking the regulatory code.
|
Academic Article
|
A comparative study of endoderm differentiation in humans and chimpanzees.
|
Academic Article
|
A Comparative Assessment of Human and Chimpanzee iPSC-derived Cardiomyocytes with Primary Heart Tissues.
|
Academic Article
|
Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells.
|
Academic Article
|
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes.
|
Academic Article
|
A generally conserved response to hypoxia in iPSC-derived cardiomyocytes from humans and chimpanzees.
|
Academic Article
|
Discovery and characterization of variance QTLs in human induced pluripotent stem cells.
|
Academic Article
|
Dynamic genetic regulation of gene expression during cellular differentiation.
|
Academic Article
|
A comparison of gene expression and DNA methylation patterns across tissues and species.
|
Academic Article
|
Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation.
|
Academic Article
|
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis.
|
Academic Article
|
Effective study design for comparative functional genomics.
|
Academic Article
|
Prime time for primate functional genomics.
|
Academic Article
|
Alternative polyadenylation mediates genetic regulation of gene expression.
|
Academic Article
|
A TAD Skeptic: Is 3D Genome Topology Conserved?
|
Academic Article
|
Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes.
|
Academic Article
|
Divergence in alternative polyadenylation contributes to gene regulatory differences between humans and chimpanzees.
|
Academic Article
|
Functional dynamic genetic effects on gene regulation are specific to particular cell types and environmental conditions.
|
Academic Article
|
Benchmarking sequencing methods and tools that facilitate the study of alternative polyadenylation.
|
Academic Article
|
Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation.
|
Academic Article
|
Human embryoid bodies as a novel system for genomic studies of functionally diverse cell types.
|
Academic Article
|
Evolutionary insights into primate skeletal gene regulation using a comparative cell culture model.
|
Grant
|
Development of iPSCs for comparative genomics in primates
|
Grant
|
Analysis and interpretation of noncoding regulatory variation
|
Grant
|
Mapping eQTLs that affect susceptibility to Tuberculosis
|
Grant
|
A National iPS Cell Network with Deep Phenotyping for Translational Research
|
Grant
|
eQTL mapping in iPSC-derived differentiated cardiomyocytes
|
Grant
|
Mapping QTLs Associated with Variation in RNA Decay Rates
|
Grant
|
Characterizing and mapping gene regulatory robustness in cardiomyoctes
|
Grant
|
Characterizing and Understanding Variation in Gene Regulatory Mechanisms Within and Between Species'
|
Grant
|
Using single cell RNA-seq to study regulatory noise and robustness
|
Grant
|
Genes, genomes, and genotoxicity: in vivo epigenetic toxicology of 1,3-butadiene
|
Academic Article
|
Guided Differentiation of Pluripotent Stem Cells for Cardiac Cell Diversity.
|
Academic Article
|
The relationship between regulatory changes in cis and trans and the evolution of gene expression in humans and chimpanzees.
|
Academic Article
|
Induced Pluripotent Stem Cells in Disease Biology and the Evidence for Their In Vitro Utility.
|
Academic Article
|
Genetic regulatory effects in response to a high-cholesterol, high-fat diet in baboons.
|